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| Registros recuperados : 14 | |
| 4. |  | DINIZ, F. M.; IYENGAR, A.; LIMA, P. S. da C.; MACLEAN, N.; BENTZEN, P. Application of a double-enrichment procedure for microsatellite isolation and the use tailed primers for high throughput genotyping. Genetics and Molecular Biology, São Paulo, v. 30, n. 2, p. 380-384, mar. 2007.| Biblioteca(s): Embrapa Meio-Norte. |
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| 5. | | SANTOS, M. F.; SOUZA, I. G. B.; GOMES, S. O.; SILVA, G. R.; BENTZEN, P.; DINIZ, F. M. Isolation and characterization of microsatellite markers in the spiny lobster, Panulirus echinatus Smith, 1869 (Decapoda: Palinuridae) by Illumina MiSeq sequencing. Journal of Genetics, v. 97, Online resources, p. e25-e30, 2018.| Biblioteca(s): Embrapa Meio-Norte. |
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| 6. | | BRITTO, F. B.; DINIZ, F. M.; KOBAYASHI, A. K.; LIMA, P. S. C.; ARAÚJO, E. C. E.; BENTZEN, P. Caracterização da estrutura genética do pinhão manso (Jatropha curcas L.): isolamento de fragmentos de dna enriquecidos com sequências de microssatélites. In: CONGRESSO BRASILEIRO DE PLANTAS OLEAGINOSAS, ÓLEOS, GORDURAS E BIODIESEL, 5.; CLÍNICA TECNOLÓGICA EM BIODIESEL, 2., 2008, Lavras. Biodiesel: tecnologia limpa. Revista de Resumos. Lavras: UFLA, 2008. p. 105| Biblioteca(s): Embrapa Meio-Norte. |
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| 7. | | BRITTO, F. B.; DINIZ, F. M.; KOBAYASHI, A. K.; LIMA, P. S. C.; ARAÚJO, E. C. E.; BENTZEN, P. Caracterização da estrutura genética do pinhão manso (Jatropha curcas L.): isolamento de fragmentos de dna enriquecidos com sequências de microssatélites. In: CONGRESSO BRASILEIRO DE PLANTAS OLEAGINOSAS, ÓLEOS, GORDURAS E BIODIESEL, 5.; CLÍNICA TECNOLÓGICA EM BIODIESEL, 2., 2008, Lavras. Biodiesel: tecnologia limpa. Anais... Lavras: UFLA, 2008. 8 p.| Biblioteca(s): Embrapa Meio-Norte. |
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| 8. | | SILVA, G. R. da; SOUZA, I. G. de B.; PEREIRA, F. de M.; SOUZA, B. de A.; LOPES, M. T. do R.; BENTZEN, P.; DINIZ, F. M. Genome-wide discovery and characterization of microsatellite markers from Melipona fasciculata (Hymenoptera: Apidae), cross-amplifi cation and a snapshot assessment of the genetic diversity in two stingless bee populations. European Journal of Entomology, v. 115, p. 614-619, 2018.| Biblioteca(s): Embrapa Meio-Norte. |
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| 9. | | SOUZA, I. G. B.; PATERSON, I.; McBRIDE, M. C.; SOUZA, B. A.; PEREIRA, F. M.; LOPES, M. T. R.; BENTZEN, P.; DINIZ, F. M. Isolation and characterization of 23 microsatellite loci in the stingless bee Melipona subnitida using next-generation sequencing. Conservation Genetics Resources, v. 7, n. 1, p. 239-241, 2015.| Biblioteca(s): Embrapa Meio-Norte. |
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| 10. | | GOMES, S. O.; SOUZA, I. G. B.; SANTOS, M. F.; SILVA, G. R.; ALBRECHT, M.; MCKINLEY, A. S.; BENTZEN, P.; DINIZ, F. M. Discovery of novel NGS-mined microsatellite markers and an exploratory analysis of genetic differentiation between two Western Atlantic populations of Cardisoma guanhumi Latreille, 1825 (Decapoda: Brachyura: Gecarcinidae). Journal of Crustacean Biology, v. 32, n. 2, p. 1-5, 2019.| Biblioteca(s): Embrapa Caprinos e Ovinos; Embrapa Meio-Norte. |
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| 11. | | RAPOSO, R. da S.; BRITTO, F. B.; SOUZA, I. G. de B; CARVALHO, A. M. F. de; KOBAYASHI, A. K.; LAVIOLA, B. G.; BENTZEN, P.; DINIZ, F. M. Development and use of novel microsatellite markers from double-enriched genomic libraries in Guatemalan Jatropha curcas. Biochemical Systematics and Ecology, v. 59, p. 168-173, 2015.| Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte. |
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| 12. | | BRITTO, F. B.; SABÓIA, E. N.; KOBAYASHI, A. K.; LAVIOLA, B. G.; ROSADO-LAVIOLA, T. B.; BENTZEN, P.; DINIZ, F. M. Molecular markers for the assessment of genetic diversity in Jatropha curcas L. In: CONGRESSO BRASILEIRO DE PESQUISA EM PINHÃO MANSO, 1., 2009, Brasília, DF. Anais... Brasília, DF: Embrapa Agroenergia; São Paulo: ABPPM, 2009. Editores: Bruno Galveas Laviola, Sérgio Delmar dos Anjos e Silva, Júlio César Albrecht. 1 CD-ROM.| Biblioteca(s): Embrapa Agroenergia. |
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| 13. | | BRITTO, F. B.; SCHMIDT, A. J.; CARVALHO, A. M. F.; VASCONCELOS, C. C. M. P.; FARIAS, A. M.; BENTZEN, P.; DINIZ, F. M. Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast. PeerJ, v. 6, Article e4702, Apr. 2018.| Biblioteca(s): Embrapa Caprinos e Ovinos. |
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| 14. | | SILVA, G. R. da; SOUZA, I. G. de B.; PEREIRA, F. de M.; LOPES, M. T. do R.; SOUZA, B. de A.; BENTZEN, P.; DINIZ, F. M. Sequenciamento de nova geração no desenvolvimento de Marcadores Microssatélites Dinucleotideos para abelhas-sem-ferrão. In: CONGRESSO BRASILEIRO DE RECURSOS GENÉTICOS, 4., 2016, Curitiba. Recursos genéticos no Brasil: a base para o desenvolvimento sustentável: anais. Brasília, DF: Sociedade Brasileira de Recursos Genéticos, 2016. p. 103.| Biblioteca(s): Embrapa Meio-Norte. |
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| Registros recuperados : 14 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Caprinos e Ovinos. |
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Data corrente: |
04/12/2018 |
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Data da última atualização: |
04/12/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
BRITTO, F. B.; SCHMIDT, A. J.; CARVALHO, A. M. F.; VASCONCELOS, C. C. M. P.; FARIAS, A. M.; BENTZEN, P.; DINIZ, F. M. |
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Afiliação: |
Universidade Federal do Piauí (UFPI) - Teresina, PI, Brazil.; Universidade Federal do Sul da Bahia (UFSB) - Teixeira de Freitas, BA, Brazil.; Pós-graduação - Embrapa Meio-Norte - Teresina - PI, Brazil.; Universidade Federal do Piauí (UFPI) - Northeast Biotechnology Network RENORBIO - Teresina, PI, Brazil.; Universidade Federal do Piauí (UFPI) - Northeast Biotechnology Network RENORBIO - Teresina, PI, Brazil.; Department of Biology, Dalhousie University - Halifax, NS, Canada.; FABIO MENDONCA DINIZ, CNPC. |
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Título: |
Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
PeerJ, v. 6, Article e4702, Apr. 2018. |
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DOI: |
DOI 10.7717/peerj.4702 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Background: The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Methods:Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Results:Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was significant differentiation among localities, despite of the low value of FST (= 0.019; P < 0.001). FST and Jost's D indexes were also estimated in pairwise comparisons and showed significant differences between most of the surveyed site pairs (P < 0.05). Structure evidenced a single genetic group among samples, however SAShA pointed to a non-panmictic condition (P = 0.011). AMOVA detected four statistical significant clusters with low level of differentiation (FCT = 0.037; P = 0.023). The gene flow model that best described the population connectivity was the island model, with ?24 crabs being exchanged among localities per generation.DIscussion:The high migration rates found among localities seem to be the main force acting to sustain the distribution of the genetic diversity of U. cordatus. Despite the high gene flow and the weak population structure among samples, the significant genetic differences found suggest that gene flow alone does not bypass the effects of genetic drift, natural selection and/or human exploitation. These findings are vital for the establishment of a database to be used in the development of conservation programs. MenosAbstract: Background: The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Methods:Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Results:Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was signif... Mostrar Tudo |
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Palavras-Chave: |
Conservation; Fish Science; Marine Biology; Microsatellite; Microsatellites; Migration rate. |
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Thesagro: |
Ucides Cordatus. |
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Thesaurus NAL: |
Animal ecology; Animal genetics; Fisheries; Gene flow; Population structure. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/187663/1/CNPC-2018-Population.pdf
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Marc: |
LEADER 03664naa a2200349 a 4500
001 2100647
005 2018-12-04
008 2018 bl uuuu u00u1 u #d
024 7 $aDOI 10.7717/peerj.4702$2DOI
100 1 $aBRITTO, F. B.
245 $aPopulation connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast.$h[electronic resource]
260 $c2018
520 $aAbstract: Background: The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Methods:Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Results:Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was significant differentiation among localities, despite of the low value of FST (= 0.019; P < 0.001). FST and Jost's D indexes were also estimated in pairwise comparisons and showed significant differences between most of the surveyed site pairs (P < 0.05). Structure evidenced a single genetic group among samples, however SAShA pointed to a non-panmictic condition (P = 0.011). AMOVA detected four statistical significant clusters with low level of differentiation (FCT = 0.037; P = 0.023). The gene flow model that best described the population connectivity was the island model, with ?24 crabs being exchanged among localities per generation.DIscussion:The high migration rates found among localities seem to be the main force acting to sustain the distribution of the genetic diversity of U. cordatus. Despite the high gene flow and the weak population structure among samples, the significant genetic differences found suggest that gene flow alone does not bypass the effects of genetic drift, natural selection and/or human exploitation. These findings are vital for the establishment of a database to be used in the development of conservation programs.
650 $aAnimal ecology
650 $aAnimal genetics
650 $aFisheries
650 $aGene flow
650 $aPopulation structure
650 $aUcides Cordatus
653 $aConservation
653 $aFish Science
653 $aMarine Biology
653 $aMicrosatellite
653 $aMicrosatellites
653 $aMigration rate
700 1 $aSCHMIDT, A. J.
700 1 $aCARVALHO, A. M. F.
700 1 $aVASCONCELOS, C. C. M. P.
700 1 $aFARIAS, A. M.
700 1 $aBENTZEN, P.
700 1 $aDINIZ, F. M.
773 $tPeerJ$gv. 6, Article e4702, Apr. 2018.
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Embrapa Caprinos e Ovinos (CNPC) |
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